Publication Records

BLAHUTA, Jiří, Kamil MATULA and Petr SOSÍK. Program pro Gymnázium Třinec. In Zažij dopoledne na Ústavu informatiky, pro střední školy. Opava: Filozoficko-přírodovědecká fakulta v Opavě, Ústav informatiky, 2024.

LANGER, Miroslav, Daniel VALENTA and Petr SOSÍK. 2D P Colony for Vicinity Search Optimisation. In 25th Conference on Membrane Computing (CMC 2024). 2024.

PERÉZ-JIMÉNEZ, Mario J., Claudio ZANDRON, Petr SOSÍK and David ORELLANA-MARTÍN. Preface of the special issue on computational complexity and complex systems. Journal of Membrane Computing. Springer Nature, 2023, vol. 5, No 3, p. 190-192. ISSN 2523-8906. Available from: https://dx.doi.org/10.1007/s41965-023-00126-9.

CIENCIALA, Luděk, Lucie CIENCIALOVÁ, Kateřina BISSELL, Kamil MATULA, Anna NOVOTNÁ, Radka POLÁKOVÁ, Petr SOSÍK and Šárka VAVREČKOVÁ. The 24th Conference on Membrane Computing. 2023.

SOSÍK, Petr. Watson-crick (D)0 L systems: a survey. Journal of Membrane Computing. Springer Nature, 2023, vol. 5, No 3, p. 182-189. ISSN 2523-8906. Available from: https://dx.doi.org/10.1007/s41965-023-00130-z.

CIENCIALOVÁ, Lucie, Luděk CIENCIALA and Petr SOSÍK. Workshop on Natural Computing 2023. 2023.

GARZON, Max, Petr SOSÍK, Jan DRASTIK and Omar SKALLI. A Self‐Controlled and Self‐Healing Model of Bacterial Cells. Membranes. Basel: MDPI, 2022, vol. 12, No 7, p. 1-16. ISSN 2077-0375. Available from: https://dx.doi.org/10.3390/membranes12070678.

MARTINŮ, Jiří, Luděk CIENCIALA, Daniel VALENTA, Lucie CIENCIALOVÁ and Petr SOSÍK. Autonomní diagnostický systém pro prediktivní diagnostiku vozidlové platformy (Autonomous diagnostic system for predictive diagnostics of the vehicle platform). 2022.

SOSÍK, Petr and Jan DRASTIK. Computational Universality and Efficiency in Morphogenetic Systems. Online. In Durand-Lose, J.; Vaszil, G. Machines, Computations, and Universality. 13419th ed. Cham: Springer Science and Business Media Deutschland GmbH, 2022, p. 158-171. ISBN 978-3-031-13501-9. Available from: https://dx.doi.org/10.1007/978-3-031-13502-6_11.

SOSÍK, Petr. Morphogenetic computing: computability and complexity results. Natural Computing. Springer Science and Business Media, 2022, vol. 22, No 1, p. 161-170. ISSN 1567-7818. Available from: https://dx.doi.org/10.1007/s11047-022-09899-x.

CIENCIALA, Luděk, Lucie CIENCIALOVÁ and Petr SOSÍK. P colonies with agent division. Information Sciences. Amsterodam, Netherlands: Elsevier, 2022, vol. 589, April 2022, p. 162-169. ISSN 0020-0255. Available from: https://dx.doi.org/10.1016/j.ins.2021.12.094.

SOSÍK, Petr, Max GARZON, Vladimír SMOLKA and Jan DRASTIK. Morphogenetic systems for resource bounded computation and modeling. Information Sciences. Amsterodam, Netherlands: Elsevier, 2021, vol. 547, 8 February 2021, p. 814-827. ISSN 0020-0255. Available from: https://dx.doi.org/10.1016/j.ins.2020.08.073.

SOSÍK, Petr, Max GARZON and Jan DRASTIK. Self-healing turing-universal computation in morphogenetic systems. Natural Computing. Springer Science and Business Media, 2021, vol. 20, No 4, p. 739-750. ISSN 1567-7818. Available from: https://dx.doi.org/10.1007/s11047-021-09860-4.

PAVLÍČEK, Martin, Tomáš FILIP and Petr SOSÍK. ZREC architecture for textual sentiment analysis. Online. In Brejová, Broňa; Ciencialová, Lucie; Holeňa, Martin; Mráz, František; Prdubská, Dana; Plátek, Martin; Vinař, Tomáš. Proceedings of the 21st Conference Information Technologies – Applications and Theory (ITAT 2021). 2962nd ed. Slovensko: CEUR Workshop Proceedings, 2021, p. 222-228. ISSN 1613-0073.

PAVLÍČEK, Martin, Tomáš FILIP and Petr SOSÍK. ZREC architecture for textual sentiment analysis: Technical and soft computing aspects of architecture. In ITAT 2021: Workshop on Natural Computing. 2021.

BLAHUTA, Jiří, Tomáš SOUKUP and Petr SOSÍK. Approach to automatic segmentation of atherosclerotic plaque in B-images using active contour algorithm adapted by convolutional neural network to echogenicity index computation. Online. In Holeňa, Martin; Horváth, Tomáš; Kelemenová, Alica; Mráz, František; Pardubská, Dana; Plátek, Martin; Sosík, Petr. Proceedings of the 20th Conference Information Technologies - Applications and Theory (ITAT 2020). 2718th ed. Slovensko: CEUR Workshop Proceedings, 2020, p. 223-229. ISSN 1613-0073.

SOSÍK, Petr, Jan DRASTIK, Vladimír SMOLKA and Max GARZON. From P systems to morphogenetic systems: an overview and open problems. Journal of Membrane Computing. Singapore: Springer Singapore, 2020, vol. 2020, No 2, p. 380-391. ISSN 2523-8906. Available from: https://dx.doi.org/10.1007/s41965-020-00057-9.

SMOLKA, Vladimír, Jan DRASTIK, Jaroslav BRADÍK, Max GARZON and Petr SOSÍK. Morphogenetic systems: Models and experiments. BioSystems. Dublin: Elsevier Ireland, 2020, vol. 198, December 2020, p. 1-12. ISSN 0303-2647. Available from: https://dx.doi.org/10.1016/j.biosystems.2020.104270.

SOSÍK, Petr. Non-sequential Computing. Opava: Institute of Computer Science, Faculty of Philosophy and Science in Opava, Silesian University in Opava, 2020, 54 pp.

SOSÍK, Petr and Alice KELEMENOVÁ. Workshop on Natural Computing. 2020.

PAVLÍČEK, Martin, Tomáš FILIP and Petr SOSÍK. Zrec.org - Psychosocial Phenomena Studies in Cyberspace. Online. In Holeňa, Martin; Horváth, Tomáš; Kelemenová, Alica; Mráz, František; Pardubská, Dana; Plátek, Martin; Sosík, Petr. Information Technologies – Applications and Theory. 2718th ed. Slovensko: CEUR Workshop Proceedings, 2020, p. 209-216. ISSN 1613-0073.

SOSÍK, Petr, Vladimír SMOLKA and Jan DRASTIK. Cytos: Simulator of Morphogenetic Systems. 2019.

SOSÍK, Petr, Vladimír SMOLKA, Jaroslav BRADÍK and Max GARZON. Modeling Plant Development with M Systems. In T. Hinze; G. Rozenberg; A. Salomaa; C. Zandron. Membrane Computing. CMC 2018. Lecture Notes in Computer Science. Cham: Springer, 2019, p. 246-257. ISBN 978-3-030-12796-1. Available from: https://dx.doi.org/10.1007/978-3-030-12797-8_17.

CIENCIALOVÁ, Lucie, Erzsébet CSUHAJ-VARJÚ, Luděk CIENCIALA and Petr SOSÍK. P colonies. Journal of Membrane Computing. Singapore: Springer Singapore, 2019, vol. 1, No 3, p. 178-197. ISSN 2523-8906. Available from: https://dx.doi.org/10.1007/s41965-019-00019-w.

SOSÍK, Petr. P systems attacking hard problems beyond NP: a survey. Journal of Membrane Computing. Singapore: Springer Singapore, 2019, vol. 1, No 2, p. 198-208. ISSN 2523-8906. Available from: https://dx.doi.org/10.1007/s41965-019-00017-y.

VALENTA, Daniel and Petr SOSÍK. Význam, uplatnění a návrhy na vylepšení smečkových algoritmů (Purpose, use and suggestions of grey wolf algorithm improvement). In Kognícia a umelý život 2019. 2019. ISBN 978-80-223-4720-4.

CIENCIALA, Luděk, Lucie CIENCIALOVÁ, Erzsébet CSUHAJ-VARJÚ and Petr SOSÍK. A logical representation of P colonies: An introduction. Online. In Enjoying Natural Computing. 11270 LNCS. Cham: Springer Verlag, 2018, p. 66-76. Lecture Notes in Computer Science. ISBN 978-3-030-00265-7. Available from: https://dx.doi.org/10.1007/978-3-030-00265-7_6.

CIENCIALOVÁ, Lucie, Luděk CIENCIALA and Petr SOSÍK. Generalized P colonies with passive environment. Theoretical Computer Science. Amsterdam: Elsevier, 2018, vol. 724, 9 May 2018, p. 61-68. ISSN 0304-3975. Available from: https://dx.doi.org/10.1016/j.tcs.2017.12.009.

HARAZIM, Markéta, Ivan HORÁČEK, Lucie JAKEŠOVÁ, Kristína LUERMANN, Jiří C. MORAVEC, Morgan SHANNON, Jiří PIKULA, Petr SOSÍK, Zuzana VAVRUŠOVÁ, Alexandra ZAHRADNÍKOVÁ, Jan ZUKAL and Natália MARTÍNKOVÁ. Natural selection in bats with historical exposure to white-nose syndrome. BMC Zoology. London: BioMed Central, 2018, vol. 3, No 8, p. nestránkováno, 13 pp. ISSN 2056-3132. Available from: https://dx.doi.org/10.1186/s40850-018-0035-4.

SOSÍK, Petr, Vladimír SMOLKA, Jan DRASTIK, Jaroslav BRADÍK and Max H. GARZÓN. On the robust power of morphogenetic systems for time bounded computation. Online. In GHEORGHE, Marian; ROZENBERG, Grzegorz; SALOMAA, Arto; ZANDRON, Claudio. Lecture Notes in Computer Science. volume 10725. Cham: Springer Verlag, 2018, p. 270-292. ISBN 978-3-319-73359-3. Available from: https://dx.doi.org/10.1007/978-3-319-73359-3_18.

BENEŠ, David, Alfonso RODRIGUEZ-PATON and Petr SOSÍK. Directed evolution of biocircuits using conjugative plasmids and CRISPR-Cas9: design and in silico experiments. Natural Computing. Springer Netherlands, 2017, vol. 16, No 3, p. 497-505. ISSN 1567-7818. Available from: https://dx.doi.org/10.1007/s11047-016-9595-9.

SOSÍK, Petr, Vladimír SMOLKA, Jan DRASTIK, Tyler G. MOORE and Max H. GARZÓN. Morphogenetic and homeostatic self-assembled systems. Online. In Patitz, M.J.; Stannett, M. Lecture Notes in Computer Science. 10240th ed. Cham: Springer Verlag, 2017, p. 144-159. ISBN 978-3-319-58187-3. Available from: https://dx.doi.org/10.1007/978-3-319-58187-3_11.

CIENCIALOVÁ, Lucie, Luděk CIENCIALA and Petr SOSÍK. P Colonies with Evolving Environment. In Leporati, A.; Rozenberg, G.; Salomaa, A.; Zandron, C. Membrane Computing: 17th International Conference, CMC 2016, Milan, Italy, July 25-29, 2016, Revised Selected Papers. 10105th ed. Cham: Springer International Publishing, 2017, p. 151-164. ISBN 978-3-319-54071-9. Available from: https://dx.doi.org/10.1007/978-3-319-54072-6.

CIENCIALOVÁ, Lucie, Luděk CIENCIALA and Petr SOSÍK. P Colonies with Evolving Environment. In Leporati, A.; Rozenberg, G.; Salomaa, A.; Zandron, C. Membrane Computing: 17th International Conference, CMC 2016, Milan, Italy, July 25-29, 2016, Revised Selected Papers. 10105th ed. Cham: Springer International Publishing, 2017, p. 151-164. ISBN 978-3-319-54071-9. Available from: https://dx.doi.org/10.1007/978-3-319-54072-6.

SOSÍK, Petr and Miroslav LANGER. Small (purely) catalytic P systems simulating register machines. Theoretical Computer Science. Amsterdam: Elsevier, 2016, vol. 623, p. 65-74. ISSN 0304-3975. Available from: https://dx.doi.org/10.1016/j.tcs.2015.09.020.

SOSÍK, Petr and Luděk CIENCIALA. A limitation of cell division in tissue P systems by PSPACE. Journal of Computer and System Sciences. Elsevier, 2015, Volume 81, Issue 2, p. 473-484.

BENEŠ, David, Petr SOSÍK and A RODRIGUEZ-PATON. An Autonomous In Vivo Dual Selection Protocol for Boolean Genetic Circuits. ARTIFICIAL LIFE. CAMBRIDGE: MIT PRESS, 2015, vol. 21, No 2, p. 247-260. ISSN 1064-5462. Available from: https://dx.doi.org/10.1162/ARTL_a_00160.

PEREZ-JIMENEZ, MJ and Petr SOSÍK. An Optimal Frontier of the Efficiency of Tissue P Systems with Cell Separation. FUNDAMENTA INFORMATICAE. AMSTERDAM: IOS PRESS, 2015, vol. 138, 1-2, p. 45-60. ISSN 0169-2968. Available from: https://dx.doi.org/10.3233/FI-2015-1197.

FREUND, R and Petr SOSÍK. On the Power of Catalytic P Systems with One Catalyst. CHAM: SPRINGER INTERNATIONAL PUBLISHING AG, 2015, p. 137-152. ISBN 978-3-319-28475-0. Available from: https://dx.doi.org/10.1007/978-3-319-28475-0_10.

ALHAZOV, A, R FREUND and Petr SOSÍK. Small P Systems with Catalysts or Anti-Matter Simulating Generalized Register Machines and Generalized Counter Automata. COMPUTER SCIENCE JOURNAL OF MOLDOVA. KISHINEV: INST MATHEMATICS & COMPUTER SCIENCE ACAD, 2015, vol. 23, No 3, p. 304-328. ISSN 1561-4042.